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| Politikos, Dimitrios; Huret, Martin; Petitgas, Pierre. |
| Adult anchovies in the Bay of Biscay perform north to south migration from late winter to early summer for spawning. However, what triggers and drives the geographic shift of the population remains unclear and poorly understood. An individual-based fish model has been implemented to explore the potential mechanisms that control anchovy's movement routes toward its spawning habitats. To achieve this goal, two fish movement behaviors – gradient detection through restricted area search and kinesis – simulated fish response to its dynamic environment. A bioenergetics model was used to represent individual growth and reproduction along the fish trajectory. The environmental forcing (food, temperature) of the model was provided by a coupled... |
| Tipo: Text |
Palavras-chave: Individual-based model; Behavioral movement; Dynamic Energy Budget; Anchovy; Bay of Biscay. |
| Ano: 2015 |
URL: http://archimer.ifremer.fr/doc/00273/38446/36868.pdf |
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| Thomas, Yoann; Garen, Pierre; Pouvreau, Stephane. |
| We applied, for the first time, a dynamic energy budget (DEB) growth model to the larval phase in the pearl oyster Pinctada margaritifera var. cumingii (Linnaeus, 1758) to evaluate the impact of spatio-temporal variation in the atoll lagoon environment on its capacity for development. The specific parameters of the model, which represent ingestion, temperature effect and the relationship between length and biovolume of the larvae, were determined from experiments or taken from the literature. The interpretation of the values of these parameters allowed us to identify the underlying adaptive character trait: P. margaritifera larvae have a good capacity to exploit low food concentrations and a narrow range of thermal tolerance restricted to hydrobiological... |
| Tipo: Text |
Palavras-chave: Growth Model; Dynamic Energy Budget; Larva; Pinctada Margaritifera; Atoll Lagoon. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00048/15919/13346.pdf |
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| Casas, Stellio. |
| Monitoring coastal contamination of trace metals using bivalve molluscs as quantitative bioindicators is widely used in many international monitoring programs. The bioaccumulation of metal within an organism results from the interaction between physiological (growth, loss of weight, absorption, accumulation), chemical (metal concentration, speciation, bioavailability) and environmental factors (temperature, SPM, chlorophyll). By utilizing the parameters above in this study, it appears that modeling metal dynamics in marine mussels is a reliable tool. The model allows understanding the bioaccumulation process which results from the interactions between biological, chemical and environmental factors. One of the objective of this study was to couple a... |
| Tipo: Text |
Palavras-chave: Biomonitoring; Dynamic Energy Budget; Model; Trace metals; Bioaccumulation; Mytilus galloprovincialis; Mussel; Bioindicator; Surveillance; Budget énergétique dynamique; Modèle; Métaux traces; Bioaccumulation; Mytilus galloprovincialis; Moule; Bioindicateur. |
| Ano: 2005 |
URL: http://archimer.ifremer.fr/doc/2005/these-356.pdf |
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| Casas, Stellio; Bacher, Cedric. |
| Bioaccumulation of metal within an organism results from interactions between physiological factors (growth, weight loss, absorption and accumulation), chemical factors (metal concentration, speciation and bioavailability) and environmental factors (temperature and food concentration). To account for such interactions in the mussel Mytilus galloprovincialis, we combined bioaccumulation and Dynamic Energy Budget models. Field experiments were conducted to measure uptake and elimination kinetics for two metals (Hg and Pb) in three Mediterranean sites with differences in contamination levels, and to calibrate the models. Metal uptake from water and from food was considered separately. Metal elimination resulted from reproduction and/or from direct excretion.... |
| Tipo: Text |
Palavras-chave: RINBIO; Inverse analysis; Dynamic Energy Budget; Bio indicator. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1965.pdf |
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| Bacher, Cedric; Gangnery, Aline. |
| We successfully tested a Dynamic Energy Budget (DEB) model of the oyster Crassostrea gigas using published environmental data and growth data collected in Than lagoon (France). Estimates of most DEB parameters were based on independent datasets and only two parameters were calibrated using our datasets: the shape parameter, which was used to convert body volume into shell length, and the half-saturation coefficient, which controlled the functional response of assimilation to food concentration, represented by chlorophyll-a concentration. The DEB model proved to be robust and generic: it was able to reproduce oyster growth in Than lagoon and other ecosystems. We also assessed population dynamics by coupling DEB equations and an Individual Based Model (IBM)... |
| Tipo: Text |
Palavras-chave: Thau Lagoon; Growth variability; Harvested production; Dynamic Energy Budget; Crassostrea gigas. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-2329.pdf |
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